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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
1
GRO-seq
1
pCHi-C
Assay category
DNA binding
14
Transcription
Date released
8
August, 2021
4
February, 2018
2
May, 2021
1
January, 2018
1
March, 2020
Available data
15
bigWig
15
tsv
14
bam
5
fastq
Organism
16
Homo sapiens
Biosample type
8
cell line
7
in vitro differentiated cells
1
tissue
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
1
hg18
Lab
16
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
16 results
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total RNA-seq
GRO-seq
pCHi-C
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
sigmoid colon
1
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