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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
ATAC-seq
1
pCHi-C
Assay category
20
DNA binding
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
6
November, 2018
1
March, 2020
Available data
21
bam
21
fastq
13
bed narrowPeak
13
bigBed narrowPeak
13
bigWig
1
bed bed3+
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
715
pancreas
696
liver
642
connective tissue
476
adipose tissue
340
epithelium
303
heart
233
brain
196
kidney
167
vasculature
166
blood vessel
147
bone element
92
artery
77
limb
68
blood
68
bodily fluid
41
musculature of body
40
nerve
37
embryo
28
eye
21
spleen
20
lung
16
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
21
AMP-T2D consortium
assay_slims!
DNA methylation
assay_title!
ATAC-seq
files.file_type!
bed broadPeak
hic
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
pCHi-C
tissue
spleen
20
1
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