Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
6
single cell RNA-seq
Hi-C
3
total RNA-seq
1
FAIRE-seq
1
pCHi-C
Assay category
26
DNA binding
9
Transcription
1
DNA accessibility
DNA methylation
Target of assay
21
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
13
October, 2019
11
May, 2019
6
August, 2021
3
February, 2020
2
February, 2021
1
March, 2020
1
November, 2017
Available data
27
bam
10
tsv
4
bigWig
2
bed broadPeak
2
bigBed broadPeak
2
tagAlign
1
bed narrowPeak
1
bigBed narrowPeak
1
fastq
1
tar
Organism
37
Homo sapiens
Biosample type
26
tissue
9
primary cell
2
cell line
Organ
254
pancreas
250
liver
169
epithelium
144
kidney
120
heart
112
connective tissue
93
bone element
64
brain
63
adipose tissue
54
eye
38
vasculature
37
blood vessel
32
musculature of body
22
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
9
spleen
8
embryo
8
skeleton
8
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
37
AMP
Genome assembly (visualization)
GRCh38
154
hg19
Lab
37
AMP-T2D consortium
assay_slims!
DNA methylation
assay_title!
Hi-C
assembly!
GRCh38
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
FAIRE-seq
pCHi-C
tissue
aorta
2
4
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
7
1
brain microvascular endothelial cell
1
cell line
smooth muscle cell of the coronary artery
2
See all biosamples
Download