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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ATAC-seq
34
single cell RNA-seq
22
snATAC-seq
20
total RNA-seq
Assay category
81
DNA accessibility
54
Transcription
DNA methylation
Date released
670
February, 2021
398
May, 2021
341
May, 2020
309
October, 2019
252
August, 2021
218
June, 2019
135
May, 2022
129
February, 2023
120
May, 2019
118
July, 2018
117
August, 2017
82
November, 2017
80
April, 2019
73
July, 2019
59
November, 2019
54
March, 2020
47
September, 2023
40
May, 2024
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
4
March, 2023
3
January, 2018
3
March, 2019
1
August, 2022
1
October, 2022
Available data
93
zippedFastqFolder
38
bed narrowPeak
24
bam
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
135
Homo sapiens
Biosample type
93
primary cell
42
tissue
Organ
40
liver
39
epithelium
39
pancreas
2
musculature of body
Project
93
HPAP
42
AMP
Genome assembly (visualization)
21
hg19
Lab
93
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA methylation
assay_title!
Hi-C
files.file_type!
fastq
xls
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ATAC-seq
single cell RNA-seq
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
20
skeletal muscle tissue
1
1
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