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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
17
small RNA-seq
8
Hi-C
3
single cell RNA-seq
2
ATAC-seq
2
FAIRE-seq
Assay category
54
Transcription
DNA methylation
8
3D chromatin structure
4
DNA accessibility
Target of assay
3
control
Date released
556
February, 2021
406
November, 2017
396
August, 2017
395
May, 2021
341
May, 2020
306
October, 2019
226
August, 2021
183
June, 2019
169
February, 2023
168
July, 2018
159
May, 2022
99
May, 2019
94
December, 2017
81
November, 2018
76
October, 2018
73
September, 2018
66
July, 2019
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
62
bigWig
58
bam
54
tsv
4
bed bed3+
4
hdf5
3
bed narrowPeak
2
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
48
tissue
18
primary cell
Organ
17
connective tissue
16
brain
heart
12
adipose tissue
9
blood vessel
9
vasculature
8
liver
8
musculature of body
7
epithelium
7
kidney
4
limb
4
pancreas
3
artery
1
pericardium
Project
66
AMP
Genome assembly (visualization)
61
hg19
56
GRCh38
Lab
66
AMP-T2D consortium
assay_slims!
DNA methylation
assay_title!
RNA microarray
snDrop-seq
organ_slims!
heart
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
small RNA-seq
Hi-C
single cell RNA-seq
ATAC-seq
FAIRE-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
right lobe of liver
2
2
+ See 14 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 10 more…
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