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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
ChIP-seq
1
ATAC-seq
1
total RNA-seq
Assay category
9
DNA accessibility
6
DNA binding
1
Transcription
Target of assay
6
control
Date released
8
January, 2021
3
January, 2019
3
November, 2018
1
February, 2020
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
bigBed narrowPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
8
primary cell
7
cell line
1
tissue
Organ
802
pancreas
648
connective tissue
474
adipose tissue
426
liver
394
epithelium
289
heart
244
kidney
157
brain
150
vasculature
149
blood vessel
116
artery
75
bone element
54
eye
43
musculature of body
37
embryo
37
limb
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
10
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
8
AMP
8
T1D
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_slims!
DNA methylation
assay_title!
RNA microarray
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
16 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
total RNA-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
tissue
C1 segment of cervical spinal cord
1
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