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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
15
small RNA-seq
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
DNA methylation
18
Transcription
8
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
278
October, 2019
257
August, 2017
219
August, 2021
216
June, 2019
216
May, 2021
161
February, 2021
120
May, 2019
113
May, 2022
112
February, 2023
100
May, 2020
91
November, 2017
80
April, 2019
74
October, 2018
49
April, 2018
48
July, 2018
47
March, 2020
47
September, 2018
47
September, 2023
43
September, 2020
41
November, 2019
40
May, 2024
December, 2018
33
July, 2019
31
December, 2017
29
November, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
29
bigWig
26
bam
18
tsv
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
33
Homo sapiens
Biosample type
25
tissue
8
primary cell
Organ
12
brain
6
musculature of body
5
heart
4
blood vessel
4
connective tissue
4
limb
liver
4
vasculature
3
adipose tissue
2
epithelium
2
kidney
2
pancreas
1
artery
Project
33
AMP
Genome assembly (visualization)
28
hg19
24
GRCh38
Lab
33
AMP-T2D consortium
assay_slims!
DNA methylation
assay_title!
total RNA-seq
month_released!
December, 2018
organ_slims!
liver
BIOSAMPLE
ASSAY
33 results
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Clear Filters
small RNA-seq
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
gastrocnemius medialis
4
body of pancreas
2
frontal cortex
1
1
heart left ventricle
2
cerebellum (Hemisphere)
1
+ See 14 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 2 more…
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