Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
76
total RNA-seq
70
single cell RNA-seq
34
ATAC-seq
15
DNase-seq
2
Hi-C
Assay category
34
DNA accessibility
Date released
14
September, 2018
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
2
March, 2020
Available data
39
zippedFastqFolder
36
bed narrowPeak
34
bigWig
32
fastq
24
bam
22
bigBed narrowPeak
1
tsv
Organism
34
Homo sapiens
Biosample type
32
primary cell
2
cell line
Organ
41
pancreas
34
epithelium
21
liver
9
connective tissue
4
adipose tissue
4
heart
3
blood vessel
3
vasculature
2
artery
2
brain
2
limb
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
spleen
Project
24
AMP
10
HPAP
Genome assembly (visualization)
32
GRCh38
24
hg19
Lab
24
AMP-T2D consortium
10
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_slims!
DNA methylation
organ_slims!
vein
BIOSAMPLE
ASSAY
34 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
EndoC_BH1
2
Download