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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
10
total RNA-seq
6
ATAC-seq
5
STARR-seq
3
Hi-C
2
Capture-C
1
whole genome sequencing assay
Assay category
6
DNA accessibility
Date released
3
February, 2023
2
August, 2021
1
March, 2019
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
tissue
Organ
2
connective tissue
1
pancreas
Project
6
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
343
AMP-T2D consortium
75
Katalin Susztak, Upenn
49
Klaus Kaestner, Upenn
34
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
tissue
islet of Langerhans
1
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