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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
266
total RNA-seq
212
ChIP-seq
168
ATAC-seq
152
single cell RNA-seq
82
snATAC-seq
17
pCHi-C
10
MeRIP-seq
8
Hi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
August, 2021
Organism
5
Homo sapiens
Biosample type
5
cell line
Organ
2
kidney
2
liver
Project
5
AMP
Lab
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
DNA methylation
assay_title!
RRBS
lab.title!
AMP-T2D consortium
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
5 results
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STARR-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1