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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1130
total RNA-seq
1106
ChIP-seq
379
ATAC-seq
289
single cell RNA-seq
204
DNase-seq
87
RNA microarray
73
snATAC-seq
56
pCHi-C
25
Hi-C
16
small RNA-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
August, 2021
Organism
5
Homo sapiens
Biosample type
5
cell line
Organ
2
kidney
2
liver
Project
5
AMP
Lab
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
DNA methylation
month_released!
December, 2017
organ_slims!
pancreas
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
5 results
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STARR-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1