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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
28
DNase-seq
15
total RNA-seq
3
ATAC-seq
1
small RNA-seq
Assay category
106
DNA binding
31
DNA accessibility
16
Transcription
DNA methylation
Target of assay
94
histone
94
histone modification
57
broad histone mark
37
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
46
April, 2019
40
May, 2024
31
June, 2019
12
July, 2019
12
May, 2019
7
October, 2019
3
May, 2021
2
March, 2020
Available data
153
bigWig
137
bed narrowPeak
113
bam
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
16
tsv
Organism
153
Homo sapiens
Biosample type
144
tissue
8
primary cell
1
in vitro differentiated cells
Organ
621
pancreas
564
connective tissue
530
liver
422
adipose tissue
284
epithelium
260
heart
217
brain
205
kidney
190
vasculature
186
blood vessel
artery
95
limb
66
bone element
54
blood
54
bodily fluid
52
musculature of body
31
nerve
29
embryo
18
ureter
14
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
153
AMP
Genome assembly (visualization)
153
GRCh38
114
hg19
Lab
113
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
assay_slims!
DNA methylation
lab.title!
Klaus Kaestner, Upenn
organ_slims!
artery
BIOSAMPLE
ASSAY
153 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
small RNA-seq
tissue
left cardiac atrium
40
1
heart left ventricle
28
3
3
2
heart
12
18
4
1
heart right ventricle
11
1
1
right atrium auricular region
7
2
2
1
+ See 3 more…
primary cell
cardiac fibroblast
3
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
in vitro differentiated cells
cardiac fibroblast
1
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