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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
5
DNase-seq
4
total RNA-seq
3
ATAC-seq
1
Hi-C
Assay category
57
DNA binding
8
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
39
May, 2019
21
October, 2019
5
July, 2019
3
June, 2019
2
March, 2020
Available data
69
bam
69
bigWig
65
bed narrowPeak
62
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tsv
1
bedpe bed3+
1
hic
Organism
70
Homo sapiens
Biosample type
70
tissue
64
cell line
25
primary cell
Organ
482
connective tissue
424
adipose tissue
411
pancreas
267
liver
142
brain
112
heart
96
limb
91
kidney
70
blood vessel
bone element
70
vasculature
59
musculature of body
31
nerve
30
eye
27
artery
18
ureter
14
spleen
12
epithelium
12
skeleton
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
104
GRCh38
70
hg19
Lab
70
AMP-T2D consortium
assay_slims!
DNA methylation
organ_slims!
bone element
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
Hi-C
tissue
tibial artery
18
2
1
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
coronary artery
3
2
1
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