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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
5
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
DNA methylation
7
DNA accessibility
4
3D chromatin structure
Target of assay
3
control
Date released
574
February, 2021
316
May, 2021
281
November, 2017
272
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
77
December, 2017
76
July, 2019
72
September, 2018
71
November, 2018
65
April, 2019
59
November, 2019
49
April, 2018
47
October, 2018
45
August, 2021
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
October, 2022
1
March, 2019
1
May, 2023
Available data
76
bigWig
72
bam
65
tsv
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
76
Homo sapiens
Biosample type
54
tissue
22
primary cell
Organ
17
connective tissue
15
brain
15
heart
12
adipose tissue
9
blood vessel
9
vasculature
8
liver
7
epithelium
7
kidney
4
musculature of body
4
pancreas
3
artery
1
pericardium
Project
76
AMP
Genome assembly (visualization)
76
hg19
71
GRCh38
Lab
76
AMP-T2D consortium
assay_slims!
DNA methylation
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
76 results
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Clear Filters
total RNA-seq
small RNA-seq
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart left ventricle
2
2
right lobe of liver
2
2
+ See 16 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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