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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ATAC-seq
20
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
31
DNA accessibility
20
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
574
February, 2021
281
November, 2017
272
August, 2017
217
October, 2019
215
May, 2020
187
June, 2019
164
July, 2018
141
May, 2021
97
May, 2019
77
December, 2017
76
July, 2019
72
September, 2018
71
November, 2018
65
April, 2019
59
November, 2019
49
April, 2018
47
October, 2018
42
February, 2023
40
August, 2021
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
12
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
1
May, 2022
1
May, 2023
Available data
64
bam
42
bed narrowPeak
36
bigWig
20
tsv
7
fastq
5
bigBed narrowPeak
2
bed bed3+
2
bedpe bed3+
2
hic
Organism
66
Homo sapiens
Biosample type
42
tissue
14
cell line
5
in vitro differentiated cells
5
primary cell
Organ
60
pancreas
19
epithelium
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
66
hg19
64
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
2
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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