Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
58
total RNA-seq
11
ATAC-seq
7
DNase-seq
3
Hi-C
1
FAIRE-seq
Assay category
73
DNA binding
58
Transcription
19
DNA accessibility
3
3D chromatin structure
Target of assay
66
histone
66
histone modification
43
broad histone mark
23
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
64
February, 2021
39
May, 2019
37
October, 2019
7
July, 2019
3
June, 2019
3
March, 2020
Available data
150
bam
142
bigWig
90
bed narrowPeak
75
bigBed narrowPeak
58
tsv
9
bed broadPeak
9
bigBed broadPeak
7
bed bed3+
4
tagAlign
3
hic
2
bedpe bed3+
1
tar
Organism
153
Homo sapiens
Biosample type
70
tissue
64
cell line
19
primary cell
Organ
656
pancreas
liver
588
connective tissue
426
adipose tissue
305
epithelium
186
heart
164
vasculature
brain
159
blood vessel
125
kidney
96
limb
93
artery
70
bone element
70
musculature of body
55
blood
55
bodily fluid
33
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
1
pericardium
1
pituitary gland
Project
153
AMP
Genome assembly (visualization)
183
GRCh38
153
hg19
Lab
153
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA methylation
organ_slims!
brain
liver
BIOSAMPLE
ASSAY
153 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
FAIRE-seq
tissue
tibial artery
18
1
2
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
coronary artery
3
1
2
cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
endothelial cell of umbilical vein
12
2
2
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download