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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
10
ATAC-seq
Assay category
125
Transcription
10
DNA accessibility
DNA methylation
Date released
76
February, 2023
40
September, 2020
12
February, 2021
7
August, 2020
Available data
136
fastq
zippedFastqFolder
10
bigWig
Organism
135
Homo sapiens
Biosample type
135
primary cell
Organ
63
epithelium
63
pancreas
Project
135
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3444
AMP-T2D consortium
269
Kyle Gaulton, UCSD
142
Katalin Susztak, Upenn
135
Klaus Kaestner, Upenn
47
KPMP
40
Karen Mohlke, UNC
37
Bing Ren, UCSD
20
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
audit script error
assay_slims!
DNA methylation
audit.ERROR.category!
audit script error
files.file_type!
zippedFastqFolder
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
135 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
primary cell
pancreatic alpha cell
42
7
exocrine cell
39
Langerhans cell
33
pancreatic beta cell
11
3
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