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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
Assay category
56
Transcription
3
DNA accessibility
Date released
581
February, 2021
356
November, 2017
333
May, 2020
307
August, 2021
287
August, 2017
232
May, 2021
210
October, 2019
194
February, 2023
192
June, 2019
162
July, 2018
159
May, 2022
81
July, 2019
81
November, 2018
75
December, 2017
59
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
49
April, 2018
47
March, 2020
47
September, 2023
43
April, 2019
39
November, 2019
35
December, 2018
31
February, 2018
26
January, 2019
23
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
15
May, 2023
13
October, 2017
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
41
fastq
19
zippedFastqFolder
3
bigWig
Organism
59
Homo sapiens
Biosample type
59
primary cell
Organ
19
epithelium
19
pancreas
Project
59
HPAP
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
assay_slims!
DNA methylation
audit.ERROR.category!
inconsistent ontology term
organ_slims!
nerve
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
59 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
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