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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
Assay category
62
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
February, 2023
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
158
Homo sapiens
Biosample type
158
tissue
Organ
700
liver
635
connective tissue
525
pancreas
483
adipose tissue
331
heart
264
brain
197
blood vessel
197
vasculature
158
bone element
139
artery
126
kidney
121
limb
112
epithelium
77
musculature of body
61
blood
61
bodily fluid
56
eye
43
nerve
37
embryo
23
spleen
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
158
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
158
AMP-T2D consortium
0
Xin Sun, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA methylation
biosample_type!
primary cell
BIOSAMPLE
ASSAY
158 results
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RNA microarray
total RNA-seq
ATAC-seq
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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