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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
277
ChIP-seq
Assay category
277
DNA binding
Target of assay
297
transcription factor
82
recombinant protein
60
control
54
RNA binding protein
chromatin remodeller
18
histone
18
histone modification
9
broad histone mark
9
narrow histone mark
2
other context
2
other post-translational modification
Date released
226
November, 2017
40
November, 2018
11
August, 2021
Available data
272
bigWig
268
bed narrowPeak
266
fastq
265
bam
257
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
3
tar
Organism
277
Homo sapiens
Biosample type
277
cell line
37
tissue
1
in vitro differentiated cells
Organ
277
liver
41
blood
41
bodily fluid
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
1
epithelium
1
pancreas
Project
277
AMP
Genome assembly (visualization)
268
hg19
227
GRCh38
Lab
266
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
6
missing controlled_by
Audit category:
4
inconsistent control read length
assay_slims!
DNA methylation
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
277 results
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ChIP-seq
cell line
HepG2
277
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