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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
28
DNA accessibility
13
Transcription
DNA methylation
Date released
205
May, 2021
147
May, 2020
93
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
58
August, 2017
55
June, 2019
48
July, 2018
43
April, 2018
42
February, 2021
34
October, 2019
22
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
39
fastq
3
bam
2
bigWig
1
bed bed3
1
bed bed3+
1
bed narrowPeak
1
tsv
Organism
42
Homo sapiens
Biosample type
545
tissue
96
cell line
42
primary cell
26
in vitro differentiated cells
Organ
3
connective tissue
Project
39
HPAP
3
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
39
Klaus Kaestner, Upenn
3
AMP-T2D consortium
Audit category:
27
audit script error
assay_slims!
DNA methylation
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
42 results
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snATAC-seq
single cell RNA-seq
ATAC-seq
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
12
osteoblast
1
1
1
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