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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
283
ChIP-seq
Assay category
283
DNA binding
Target of assay
596
histone modification
595
histone
312
narrow histone mark
283
broad histone mark
163
control
77
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
56
May, 2019
53
August, 2017
42
November, 2017
39
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
Available data
253
bed narrowPeak
253
bigWig
222
bam
204
bigBed narrowPeak
72
tagAlign
45
fastq
20
bed broadPeak
6
bed bed3+
Organism
279
Homo sapiens
Biosample type
283
tissue
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
57
heart
41
pancreas
36
blood vessel
36
vasculature
34
limb
25
liver
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
283
AMP
Genome assembly (visualization)
242
GRCh38
198
hg19
Lab
263
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
assay_slims!
DNA methylation
biosample_type!
primary cell
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
283 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
islet of Langerhans
14
+ See 25 more…
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