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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
2
DNA accessibility
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bed narrowPeak
14
bigWig
13
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
541
connective tissue
499
pancreas
482
adipose tissue
356
liver
304
heart
298
kidney
264
brain
158
bone element
131
blood vessel
131
vasculature
121
limb
77
musculature of body
73
artery
56
eye
43
nerve
23
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
23
AMP-T2D consortium
assay_slims!
DNA methylation
organ_slims!
lymph node
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
1
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