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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
1
DNase-seq
1
single cell RNA-seq
Assay category
115
DNA binding
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
96
histone
96
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
270
August, 2021
205
February, 2023
137
February, 2021
121
May, 2021
116
August, 2017
64
October, 2019
58
May, 2020
48
March, 2020
47
September, 2023
42
May, 2022
40
May, 2024
40
September, 2020
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
360
fastq
343
bigWig
215
bed narrowPeak
115
bigBed narrowPeak
89
tsv
85
tagAlign
50
bed broadPeak
42
bed bed3+
24
bigBed broadPeak
1
csv
Organism
117
Homo sapiens
Biosample type
102
tissue
14
in vitro differentiated cells
1
primary cell
Organ
50
connective tissue
36
adipose tissue
24
liver
22
musculature of body
20
pancreas
Project
117
AMP
Genome assembly (visualization)
20
hg19
Lab
117
AMP-T2D consortium
assay_slims!
DNA methylation
files.file_type!
bam
zippedFastqFolder
BIOSAMPLE
ASSAY
117 results
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table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
subcutaneous abdominal adipose tissue
36
liver
23
skeletal muscle tissue
22
islet of Langerhans
20
right lobe of liver
1
in vitro differentiated cells
adipocyte
14
primary cell
pancreatic cell
1
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