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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ATAC-seq
34
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
Assay category
61
DNA accessibility
60
Transcription
DNA methylation
Date released
678
February, 2021
314
May, 2020
263
May, 2021
254
August, 2017
168
July, 2018
140
February, 2023
139
August, 2021
121
May, 2022
111
October, 2019
93
November, 2017
68
July, 2019
59
March, 2020
59
September, 2020
49
April, 2018
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
22
May, 2019
19
April, 2020
17
December, 2017
16
February, 2018
16
January, 2021
14
November, 2020
11
October, 2017
10
April, 2019
9
January, 2019
8
November, 2018
7
August, 2020
7
December, 2019
7
January, 2018
7
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
93
zippedFastqFolder
bed narrowPeak
24
bam
24
fastq
20
bigWig
7
txt
1
bed bed3+
Organism
121
Homo sapiens
Biosample type
93
primary cell
28
tissue
Organ
45
pancreas
39
epithelium
20
liver
2
musculature of body
Project
93
HPAP
28
AMP
Genome assembly (visualization)
1
hg19
Lab
93
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA methylation
files.file_type!
bed narrowPeak
organ_slims!
embryo
kidney
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
1
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