Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
27
snATAC-seq
10
ATAC-seq
Assay category
125
Transcription
37
DNA accessibility
DNA methylation
Date released
76
February, 2023
40
September, 2020
39
February, 2021
7
August, 2020
October, 2022
Available data
163
fastq
zippedFastqFolder
10
bigWig
Organism
162
Homo sapiens
Biosample type
162
primary cell
Organ
63
epithelium
63
pancreas
Project
162
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3861
AMP-T2D consortium
343
Kyle Gaulton, UCSD
162
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
assay_slims!
DNA methylation
files.file_type!
zippedFastqFolder
month_released!
October, 2022
BIOSAMPLE
ASSAY
162 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
primary cell
Langerhans cell
33
27
pancreatic alpha cell
42
7
exocrine cell
39
pancreatic beta cell
11
3
Download