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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
5
Hi-C
Assay category
7
DNA accessibility
5
3D chromatin structure
Date released
187
June, 2019
31
August, 2017
10
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
1
May, 2022
1
November, 2020
0
December, 2018
Available data
311
bam
311
bigWig
226
bed narrowPeak
102
bigBed narrowPeak
78
tsv
40
tagAlign
31
fastq
12
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
5
hdf5
4
hic
3
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
12
Homo sapiens
Biosample type
6
primary cell
4
tissue
2
cell line
Organ
6
blood vessel
6
vasculature
4
epithelium
4
limb
3
brain
2
artery
2
nerve
2
pancreas
2
vein
1
connective tissue
1
liver
Project
12
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_slims!
DNA methylation
target.investigated_as!
control
BIOSAMPLE
ASSAY
12 results
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DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
tissue
tibial artery
2
tibial nerve
2
cell line
Panc1
1
1
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