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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
5
total RNA-seq
1
FAIRE-seq
1
small RNA-seq
Assay category
22
DNA binding
6
Transcription
1
DNA accessibility
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
June, 2019
October, 2019
18
April, 2019
7
July, 2019
4
May, 2019
Available data
87
bed narrowPeak
64
xls
62
txt
35
bam
29
bigWig
23
bigBed narrowPeak
18
tsv
5
csv
1
hic
Organism
29
Homo sapiens
Biosample type
21
tissue
8
primary cell
Organ
613
liver
607
pancreas
550
connective tissue
421
adipose tissue
258
epithelium
178
heart
116
brain
111
vasculature
108
blood vessel
62
artery
58
bone element
55
blood
55
bodily fluid
29
embryo
29
kidney
26
musculature of body
14
spleen
6
limb
1
pericardium
Project
29
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA methylation
month_released!
June, 2019
October, 2019
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
total RNA-seq
FAIRE-seq
small RNA-seq
tissue
kidney
18
1
metanephros
1
1
primary cell
kidney epithelial cell
4
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
renal cortical epithelial cell
1
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