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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
3
Hi-C
Assay category
56
Transcription
3
3D chromatin structure
3
DNA accessibility
Date released
235
May, 2021
168
August, 2021
157
May, 2022
102
February, 2023
59
September, 2020
47
September, 2023
45
May, 2020
40
May, 2024
39
February, 2021
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
October, 2017
Available data
41
fastq
19
zippedFastqFolder
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
62
Homo sapiens
Biosample type
62
primary cell
Organ
22
epithelium
22
pancreas
Project
62
HPAP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
62
Klaus Kaestner, Upenn
AMP-T2D consortium
Audit category:
3
audit script error
assay_slims!
DNA methylation
lab.title!
AMP-T2D consortium
month_released!
October, 2017
BIOSAMPLE
ASSAY
62 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
1
pancreatic beta cell
1
1
1
pancreatic acinar cell
1
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