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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
7
November, 2018
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bed narrowPeak
14
bigWig
13
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
879
pancreas
741
liver
675
connective tissue
484
adipose tissue
465
epithelium
376
heart
348
kidney
282
brain
229
vasculature
224
blood vessel
159
bone element
141
artery
121
limb
85
musculature of body
69
blood
bodily fluid
60
eye
43
nerve
37
embryo
22
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
1
thymus
Project
22
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
22
AMP-T2D consortium
assay_slims!
DNA methylation
lab.title!
Karen Mohlke, UNC
month_released!
March, 2020
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
spleen
20
1
1
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