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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
ATAC-seq
3
single cell RNA-seq
2
RNA microarray
1
Hi-C
Assay category
8
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
709
February, 2021
406
November, 2017
398
May, 2021
396
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
94
December, 2017
81
July, 2019
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
9
tsv
6
bam
5
bigWig
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
15
Homo sapiens
Biosample type
8
tissue
5
primary cell
2
in vitro differentiated cells
Organ
6
epithelium
5
liver
5
pancreas
3
kidney
Project
15
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
4
audit script error
2
inconsistent ontology term
assay_slims!
DNA methylation
month_released!
March, 2020
BIOSAMPLE
ASSAY
15 results
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Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
RNA microarray
Hi-C
tissue
islet of Langerhans
4
1
kidney
1
kidney interstitium
1
renal glomerulus
1
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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