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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
16
ATAC-seq
2
Capture-C
2
Hi-C
Assay category
21
DNA binding
16
DNA accessibility
Transcription
2
3D chromatin structure
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
control
7
narrow histone mark
Date released
68
August, 2017
48
May, 2021
43
December, 2017
35
August, 2021
24
February, 2018
12
February, 2023
6
March, 2020
6
October, 2019
5
November, 2019
4
February, 2021
4
January, 2018
1
August, 2018
Available data
32
bam
27
bed narrowPeak
20
tagAlign
17
bigWig
2
bed bed3+
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
Organism
41
Homo sapiens
Biosample type
293
tissue
52
cell line
41
in vitro differentiated cells
36
primary cell
Organ
6
connective tissue
Project
41
AMP
Genome assembly (visualization)
32
hg19
25
GRCh38
Lab
37
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
assay_slims!
DNA sequencing
Transcription
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
ATAC-seq
Capture-C
Hi-C
in vitro differentiated cells
neural progenitor cell
21
10
adipocyte
3
1
cardiac precursors (cardiac muscle cell)
1
1
cardiomyocytes (cardiac muscle cell)
1
1
osteoblast
1
1
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