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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
DNase-seq
Assay category
58
DNA binding
Target of assay
44
transcription factor
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
Available data
580
bam
520
bigWig
427
fastq
402
bed narrowPeak
353
bigBed narrowPeak
119
tsv
58
bed broadPeak
58
bigBed broadPeak
20
tagAlign
3
tar
2
bed bed3+
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
Organism
58
Homo sapiens
Biosample type
58
cell line
21
primary cell
Organ
58
liver
Project
58
AMP
Genome assembly (visualization)
58
hg19
44
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
13
inconsistent control read length
assay_slims!
DNA sequencing
assay_title!
DNase-seq
month_released!
May, 2023
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
cell line
HepG2
58
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