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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ATAC-seq
14
ChIP-seq
2
Capture-C
2
Hi-C
Assay category
40
DNA accessibility
14
DNA binding
2
3D chromatin structure
Target of assay
11
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
175
May, 2021
45
May, 2020
38
May, 2022
20
August, 2021
3
February, 2023
3
March, 2019
3
October, 2022
1
October, 2017
Available data
54
bed narrowPeak
36
bigWig
18
bam
18
fastq
2
bed bed3+
2
hic
1
bedpe bed3+
Organism
58
Homo sapiens
Biosample type
39
tissue
15
cell line
4
in vitro differentiated cells
Organ
35
liver
18
pancreas
4
connective tissue
1
kidney
Project
58
AMP
Genome assembly (visualization)
64
GRCh38
58
hg19
Lab
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
15
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
assay_slims!
DNA sequencing
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ATAC-seq
ChIP-seq
Capture-C
Hi-C
tissue
liver
20
islet of Langerhans
18
kidney
1
cell line
HepG2
14
1
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
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