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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
42
transcription factor
29
histone
29
histone modification
19
control
15
broad histone mark
14
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
315
August, 2021
309
May, 2021
291
October, 2019
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
90
bam
90
fastq
70
bed narrowPeak
70
bigWig
50
bigBed narrowPeak
15
bed bed3+
Organism
90
Homo sapiens
Biosample type
48
tissue
39
in vitro differentiated cells
3
stem cell
Organ
63
liver
15
epithelium
9
embryo
Project
90
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
90
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
assay_slims!
DNA sequencing
audit.ERROR.category!
inconsistent ontology term
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
stem cell
hESC
3
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