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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
11
transcription factor
6
chromatin remodeller
5
histone
5
histone modification
3
narrow histone mark
2
RNA binding protein
2
broad histone mark
Date released
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
1
August, 2017
Available data
57
fastq
56
bam
54
bigWig
16
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
16
Homo sapiens
Biosample type
12
cell line
4
tissue
Organ
12
liver
3
brain
1
pancreas
Project
16
AMP
Genome assembly (visualization)
16
hg19
9
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
assay_slims!
DNA sequencing
month_released!
September, 2018
organ_slims!
pericardium
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
cell line
HepG2
12
tissue
brain
3
islet of Langerhans
1
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