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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
35
transcription factor
22
histone
22
histone modification
14
narrow histone mark
8
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
September, 2018
16
August, 2017
4
October, 2017
1
December, 2017
1
November, 2017
Available data
22
fastq
21
bam
20
bigWig
5
bed narrowPeak
4
bed bed3+
4
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
22
Homo sapiens
Biosample type
12
primary cell
8
tissue
1
cell line
1
in vitro differentiated cells
Organ
16
pancreas
4
brain
1
embryo
1
liver
Project
22
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
22
AMP-T2D consortium
Audit category:
22
missing controlled_by
assay_slims!
DNA sequencing
lab.title!
Katalin Susztak, Upenn
month_released!
September, 2018
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
primary cell
pancreatic endocrine cell
12
tissue
brain
4
islet of Langerhans
4
cell line
HepG2
1
in vitro differentiated cells
pancreatic endoderm
1
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