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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
Assay category
8
DNA accessibility
Date released
6
February, 2023
2
February, 2021
Available data
3198
bam
2983
bigWig
1721
bed narrowPeak
1502
tsv
1358
fastq
1042
bigBed narrowPeak
322
bed broadPeak
314
tagAlign
285
bigBed broadPeak
273
bed bed3+
157
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
bedpe
1
tagAlign bed3+
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
1
primary cell
1
tissue
Organ
6
connective tissue
4
bone element
skeleton
1
brain
1
liver
Project
8
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_slims!
DNA sequencing
award.project!
T1D
files.file_type!
bedpe
organ_slims!
skeleton
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
tissue
brain
1
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