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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
6
MeRIP-seq
2
Capture-C
2
ChIP-seq
1
Hi-C
Assay category
17
DNA accessibility
2
DNA binding
1
3D chromatin structure
Target of assay
5
control
3
nucleotide modification
Date released
16
May, 2021
6
November, 2020
4
November, 2019
2
August, 2021
February, 2023
Available data
51
bam
bigWig
35
tsv
15
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
hic
Organism
28
Homo sapiens
Biosample type
138
primary cell
28
cell line
4
in vitro differentiated cells
1
tissue
Organ
68
liver
35
pancreas
28
epithelium
10
artery
10
blood vessel
10
heart
10
vasculature
7
kidney
6
blood
6
bodily fluid
1
mammary gland
Project
28
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
22
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
28
inconsistent ontology term
assay_slims!
DNA sequencing
files.file_type!
bigWig
month_released!
February, 2023
BIOSAMPLE
ASSAY
28 results
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ATAC-seq
MeRIP-seq
Capture-C
ChIP-seq
Hi-C
cell line
EndoC_BH1
17
6
2
2
1
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