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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
5
ATAC-seq
Assay category
40
DNA binding
5
DNA accessibility
Target of assay
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
10
control
4
transcription factor
Date released
20
August, 2021
14
August, 2017
6
May, 2021
5
February, 2023
Available data
291
bam
259
bigWig
141
fastq
132
bed narrowPeak
131
tsv
40
tagAlign
25
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
243
tissue
101
primary cell
45
in vitro differentiated cells
15
cell line
Organ
19
connective tissue
3
epithelium
3
pancreas
Project
45
AMP
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_slims!
DNA sequencing
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
chondrocyte
5
cardiomyocytes
3
pancreatic PP cell
3
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