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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
4
Hi-C
4
pCHi-C
4
total RNA-seq
Assay category
4
3D chromatin structure
4
DNA accessibility
4
Transcription
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
6
bam
6
bedpe bed3+
6
bigWig
6
tsv
4
hic
2
bed narrowPeak
2
bigBed narrowPeak
2
ibed
Organism
16
Homo sapiens
Biosample type
278
tissue
24
cell line
24
primary cell
16
in vitro differentiated cells
4
stem cell
Organ
2
connective tissue
Project
16
AMP
Genome assembly (visualization)
14
hg19
6
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
assay_slims!
DNA sequencing
organ_slims!
kidney
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ATAC-seq
Hi-C
pCHi-C
total RNA-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
2
2
2
cardiac precursors (cardiac muscle cell)
1
1
1
lymphocyte of B lineage (iPSC)
1
1
1
adipocyte
2
embryonic stem cell
1
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