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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
6
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
9
DNA accessibility
6
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
6
June, 2019
3
August, 2017
3
August, 2021
3
November, 2018
1
February, 2021
1
July, 2019
Available data
688
bam
628
bigWig
474
bed narrowPeak
465
fastq
364
bigBed narrowPeak
179
tsv
86
tagAlign
67
bed broadPeak
67
bigBed broadPeak
17
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
Organism
17
Homo sapiens
Biosample type
9
tissue
7
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
17
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
assay_slims!
DNA sequencing
organ_slims!
ureter
BIOSAMPLE
ASSAY
17 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
pCHi-C
tissue
liver
2
3
retina
3
right lobe of liver
1
primary cell
hepatocyte
1
3
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
retinal pigment epithelial cell
1
cell line
HepG2
1
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