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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
312
ChIP-seq
Assay category
312
DNA binding
Target of assay
236
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
312
November, 2017
210
June, 2019
97
May, 2019
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
312
Homo sapiens
Biosample type
249
cell line
57
tissue
6
primary cell
Organ
249
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
312
AMP
Genome assembly (visualization)
280
GRCh38
258
hg19
Lab
312
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA sequencing
month_released!
November, 2018
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
312 results
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Clear Filters
ChIP-seq
cell line
HepG2
249
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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