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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
4
ChIP-seq
2
ATAC-seq
Assay category
54
Transcription
4
DNA binding
2
DNA accessibility
Target of assay
4
transcription factor
Date released
56
February, 2021
3
July, 2019
1
October, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
0
vcf
Organism
60
Homo sapiens
Biosample type
56
cell line
2
primary cell
2
tissue
Organ
542
connective tissue
532
pancreas
415
adipose tissue
264
liver
225
epithelium
130
heart
96
brain
72
vasculature
71
blood vessel
60
artery
58
bone element
29
embryo
27
kidney
21
musculature of body
7
limb
5
nerve
3
spleen
2
vein
1
blood
1
bodily fluid
1
pericardium
1
pituitary gland
Project
60
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
60
AMP-T2D consortium
assay_slims!
DNA sequencing
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
60 results
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total RNA-seq
ChIP-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
tissue
coronary artery
1
tibial artery
1
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