Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
37
DNA binding
9
DNA accessibility
Target of assay
39
transcription factor
8
RNA binding protein
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
Available data
37
bam
37
fastq
35
bigWig
34
bed narrowPeak
34
bigBed narrowPeak
Organism
46
Homo sapiens
Biosample type
38
cell line
8
primary cell
Organ
939
pancreas
719
liver
681
connective tissue
523
epithelium
490
adipose tissue
393
heart
354
kidney
284
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
46
blood
46
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
38
AMP
8
T1D
Genome assembly (visualization)
35
hg19
34
GRCh38
Lab
38
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_slims!
DNA sequencing
month_released!
November, 2018
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
37
1
primary cell
peripheral blood mononuclear cell
8
Download