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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
ATAC-seq
2
DNase-seq
Assay category
Transcription
19
DNA binding
2
DNA accessibility
Target of assay
17
transcription factor
5
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
14
August, 2017
5
October, 2018
1
June, 2019
1
November, 2018
Available data
21
bigWig
20
bam
19
fastq
9
bed narrowPeak
8
bigBed narrowPeak
6
bed bed3+
3
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
133
brain
96
heart
96
pancreas
95
liver
90
kidney
84
limb
63
blood vessel
63
vasculature
56
musculature of body
26
nerve
25
artery
21
adipose tissue
21
connective tissue
18
ureter
13
spleen
3
eye
1
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
22
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
Audit category:
12
missing controlled_by
assay_slims!
Transcription
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
tissue
white adipose tissue
12
omental fat pad
3
2
subcutaneous adipose tissue
2
adipose tissue
1
subcutaneous abdominal adipose tissue
1
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