Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
Transcription
48
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
62
May, 2022
33
February, 2021
3
October, 2022
Available data
62
zippedFastqFolder
33
fastq
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
98
Homo sapiens
Biosample type
98
primary cell
Organ
50
epithelium
50
pancreas
Project
98
HPAP
Genome assembly (visualization)
3
hg19
Lab
2019
AMP-T2D consortium
194
Kyle Gaulton, UCSD
98
Klaus Kaestner, Upenn
40
Patrick T. Ellinor, Broad
27
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Katalin Susztak, Upenn
2
Struan F.A. Grant, CHOP
1
ITG
Audit category:
30
audit script error
assay_slims!
Transcription
assay_title!
ATAC-seq
month_released!
October, 2018
BIOSAMPLE
ASSAY
98 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
48
pancreatic alpha cell
31
1
pancreatic beta cell
16
1
pancreatic acinar cell
1
Download