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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
4
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
Transcription
3
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
27
February, 2023
7
October, 2019
1
July, 2019
1
June, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
34
tissue
2
primary cell
Organ
250
pancreas
168
epithelium
138
liver
110
kidney
107
connective tissue
97
bone element
73
heart
72
vasculature
71
blood vessel
63
adipose tissue
52
artery
52
brain
36
eye
28
limb
25
musculature of body
14
blood
14
bodily fluid
12
skeleton
11
lung
11
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
36
AMP
Genome assembly (visualization)
28
hg19
Lab
36
AMP-T2D consortium
assay_slims!
Transcription
assay_title!
CRISPR genome editing followed by DNA sequencing
files.file_type!
bigWig
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
pCHi-C
ChIP-seq
RRBS
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
1
4
2
primary cell
retinal pigment epithelial cell
1
1
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