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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
10
snATAC-seq
1
pCHi-C
Assay category
28
DNA accessibility
Transcription
Date released
18
June, 2019
10
April, 2020
1
March, 2020
Available data
18
bam
18
bed bed3+
18
bed broadPeak
18
bed narrowPeak
18
bigBed broadPeak
18
bigBed narrowPeak
18
bigWig
1
tsv
Organism
28
Homo sapiens
Biosample type
29
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
19
AMP
10
LungMap
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
19
AMP-T2D consortium
10
Xin Sun, UCSD
assay_slims!
Transcription
assay_title!
CRISPR genome editing followed by DNA sequencing
organ_slims!
embryo
BIOSAMPLE
ASSAY
29 results
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DNase-seq
snATAC-seq
pCHi-C
tissue
lung
10
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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