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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
2
pCHi-C
1
RNA microarray
Assay category
Transcription
8
DNA accessibility
6
DNA methylation
Date released
7
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
March, 2020
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
8
bigWig
7
bam
7
fastq
6
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
1
in vitro differentiated cells
Organ
96
bone element
94
pancreas
93
heart
93
kidney
89
epithelium
67
vasculature
64
blood vessel
49
artery
49
limb
48
musculature of body
45
connective tissue
44
brain
37
eye
22
liver
18
ureter
17
adipose tissue
12
skeleton
5
spleen
5
vein
3
nerve
2
intestine
1
adrenal gland
1
blood
bodily fluid
1
embryo
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
thymus
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
ChIP-seq
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
17 results
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ATAC-seq
WGBS
DNase-seq
pCHi-C
RNA microarray
tissue
adipose tissue
3
3
1
omental fat pad
1
2
subcutaneous abdominal adipose tissue
3
subcutaneous adipose tissue
1
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
white fat cell
1
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